Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876085.1_cds_XP_016436012.1_31913
CDS Infomation

[gene=LOC107762189] [db_xref=GeneID:107762189] [protein=COBRA-like protein 10] [protein_id=XP_016436012.1] [location=complement(join(12522..13933,14015..14558))] [gbkey=CDS]
Sequence

ATGAAGATGGTCTCAAAAACCACAATCTTTTACATAATCTTGTTTTCTGTCACTATTAAG
GCACAAGATTATGATGGTAATTCACCACCTGCACCTCCCCCTGCAGAAAATGAATGCAAT
GGAATTTTCTTATCCTATGTATTCATCTCTAGAACCAAAGAGCTTCCCCACTTAAAGAAT
GCAAGTGCACAAGCCTGGGCCTTTAAAGCTATGGCAACAGTACTTAATGCTGGTATATAT
GAGCTCAAGAACTGGAAAATCTTCATCGGGTTTCAAAATCGCGAACTTTTAGTCTCAGCT
AGTAATGCTGTGTTAGTAAATGGTGATGATTTCCCAGCTCCTGTTGGTAATGGAACTTAC
TTAGCTGGCTATCCTCAGACAGATTTGAAAACGTCGATTGATACTGCTGGTGATTATACA
CAAATTCAAGCCGAGATTGAGTTAACAGGTACTCAGTTTGGAATCAGGCCACCGGGTTAT
CCCATGCCTAAAACTATTAAGCTTGTCAATGATGGATACAAATGTCCAGCAGCAATTCGA
AAATCAACGACACTGCACGTTTGCTGTGTGAAAGATCCAAAATTTAAGGCGAAGAATTTC
ACAACCAAGTATTTCCCACGCCAAAATGGTGATCTTTTGATCTCTTATGATGTTATGCAA
GCCTATCCGAATAACTATCAAGCGCAAGTGACTATACAAAATAATAATCCTTTGGGACGC
CTTGATCAGTGGAACTTAACTTGGGAATGGATGCGAGGAGAATTCATCTACTCAATGAGG
GGTGCATATACTCGCAAAAAGGACTACTCGGATTGTGTCTATGGTGCTGCAGGACAGTAC
TATCAAGATTTTGATTTTTCTAAAGTACTGAACTGTGAAAAGAAGCCAACTATAGCTGAT
TTGCCTCCGGATAGAGCTCAAGATAAAGATGTTGGGATGTTACCATTCTGCTGCAGAAAT
GGTAGCATCATGCCGAGTGTAATGAATGAAAGCAATTCAAAGTCTGTGTTTCAGTTACAG
GTATATAAGCTTCCACCAGATTTGAATCTAACAGCTCTTTACCCTCCTGAGAAATGGAAA
ATCAACGGTGTTCTTAATCCGGATTATAAATGTGGACAAGCCTTAAGAGTAGACGAGACA
CAATTCTCGGATCCAAGTGGACTTCAAGCTACTGTCACAGCTATTGCAAGTTGGCAAGTA
GTCTGCAATATTACCAAGCCAAAGGAAAGAGCCAACCGGTGCTGTGTTTCGTACACTGCC
TATTACAATGACTCTGTTATACCCTGCGGCACTTGTGCATGTGGCTGTGATAGTTCTGTT
AAATGCAATCAAAAAGCACCAGCACTTCTTCTTCCCCCAGAAACACTGCTGGTTCCATTC
GCAAACAGAACAGAGAAATCCGTGTATTGGGCTAAACTAAAGAACTATCATGTTCCTAGG
CCTTTACCTTGTGGTGACAACTGCGGAGTTAGCATAAATTGGCATGTTGATTCAAACTAT
AAAACAGGATGGACTGCTCGGATTACTATATTCAATTGGGAAGAAATCAATTTCGTGGAC
TGGTTCGTTGGAGTCCAGTTCAAGAAAACTGGTTCTGGCTTTGCGCAAGCTTACTCTTTC
AATGGAACTTTACTTCGAAATATGAATGACACAGTTTTCTTGACAGGATTACCTGGTTTA
AATTACTTGATAGCAGAAACAGATGGACAAAAACCTGGAGACCCTAGAGTACCTGGAAAA
CAACAATCCGTCCTTAAATTTGAGAAGAAACGTTTAGGAGTTATTGATATAGTAAATGGG
GATGGATTTCCAACTAAGTTGCTATTCAATGGGGAAGAATGTGCACTTCCCACTCATCTC
TTGACAGCGGATGGAAGAAAACGGCGTGTAAATTCTTGGCTAATCGCCATCATAACGTTG
TTAACCTTCTTGCTGATTCTAAAAGACCTGCAATGA

Peptide Sequence

PEP ID

XP_016436012.1
PEP Infomation

PREDICTED: COBRA-like protein 10 [Nicotiana tabacum]
Sequence

MKMVSKTTIFYIILFSVTIKAQDYDGNSPPAPPPAENECNGIFLSYVFISRTKELPHLKN
ASAQAWAFKAMATVLNAGIYELKNWKIFIGFQNRELLVSASNAVLVNGDDFPAPVGNGTY
LAGYPQTDLKTSIDTAGDYTQIQAEIELTGTQFGIRPPGYPMPKTIKLVNDGYKCPAAIR
KSTTLHVCCVKDPKFKAKNFTTKYFPRQNGDLLISYDVMQAYPNNYQAQVTIQNNNPLGR
LDQWNLTWEWMRGEFIYSMRGAYTRKKDYSDCVYGAAGQYYQDFDFSKVLNCEKKPTIAD
LPPDRAQDKDVGMLPFCCRNGSIMPSVMNESNSKSVFQLQVYKLPPDLNLTALYPPEKWK
INGVLNPDYKCGQALRVDETQFSDPSGLQATVTAIASWQVVCNITKPKERANRCCVSYTA
YYNDSVIPCGTCACGCDSSVKCNQKAPALLLPPETLLVPFANRTEKSVYWAKLKNYHVPR
PLPCGDNCGVSINWHVDSNYKTGWTARITIFNWEEINFVDWFVGVQFKKTGSGFAQAYSF
NGTLLRNMNDTVFLTGLPGLNYLIAETDGQKPGDPRVPGKQQSVLKFEKKRLGVIDIVNG
DGFPTKLLFNGEECALPTHLLTADGRKRRVNSWLIAIITLLTFLLILKDLQ

Transcript Sequence

Gene sequence data has not been registered.